CallableStructureAlignment (biojava 3.0.3 API)

public class CallableStructureAlignment
extends Object
implements Callable<AFPChain>

Constructors
Constructor and Description
`CallableStructureAlignment()`

Methods
Modifier and Type	Method and Description
`AFPChain`	`call()`
`Atom[]`	`getCa1()`
`AtomCache`	`getCache()`
`SynchronizedOutFile`	`getOutFile()`
`PdbPair`	`getPair()`
`void`	`setAlgorithmName(String algorithmName)`
`void`	`setCa1(Atom[] ca1)`
`void`	`setCache(AtomCache cache)`
`void`	`setOutFile(SynchronizedOutFile outFile)`
`void`	`setOutputDir(File outFileF)`
`void`	`setPair(PdbPair pair)`
`void`	`setParameters(ConfigStrucAligParams parameters)`

Constructor Detail
- CallableStructureAlignment
```
public CallableStructureAlignment()
```

public void setCache(AtomCache cache)

public SynchronizedOutFile getOutFile()

public void setOutFile(SynchronizedOutFile outFile)

public void setOutputDir(File outFileF)

public void setAlgorithmName(String algorithmName)

public void setParameters(ConfigStrucAligParams parameters)

Class CallableStructureAlignment