org.biojava.bio.structure.io.mmcif

Interface MMcifParser

All Known Implementing Classes:

SimpleMMcifParser

public interface MMcifParser

Interface that needs to be implemented by an MMcifParser

Since:

1.7

Author:

Andreas Prlic

Method Summary

Methods

Modifier and Type	Method and Description
void	addMMcifConsumer(MMcifConsumer consumer) Add a MMcifConsumer that listens to even being triggered by the parser and processes the data into a backend provided by the Consumer.
void	clearConsumers() Remove all consumers from the parser.
void	parse(BufferedReader buf) Start the actual parsing.
void	parse(InputStream inStream) Start the actual parsing.
void	removeMMcifConsumer(MMcifConsumer consumer) remove a single consumer from the parser

Method Detail

addMMcifConsumer

void addMMcifConsumer(MMcifConsumer consumer)

Add a MMcifConsumer that listens to even being triggered by the parser and processes the data into a backend provided by the Consumer.

Parameters:

consumer - a consumer object.

clearConsumers

void clearConsumers()

Remove all consumers from the parser.

removeMMcifConsumer

void removeMMcifConsumer(MMcifConsumer consumer)

remove a single consumer from the parser

Parameters:

consumer -

parse

void parse(BufferedReader buf)
           throws IOException

Start the actual parsing. The parser will trigger events that are defined by the MMcifConsumer class.

Parameters:

buf - a BufferedReader.

Throws:

IOException

parse

void parse(InputStream inStream)
           throws IOException

Start the actual parsing. The parser will trigger events that are defined by the MMcifConsumer class.

Parameters:

inStream - InputStream to parse from.

Throws:

IOException