org.biojavax.bio.db.biosql
Class BioSQLAcceptAllFilter

java.lang.Object
  extended by org.biojavax.bio.db.biosql.BioSQLAcceptAllFilter
All Implemented Interfaces:
Serializable, FeatureFilter, BioSQLFeatureFilter

public class BioSQLAcceptAllFilter
extends Object
implements BioSQLFeatureFilter

The class that accepts all features.

Use the FeatureFilter.all member.

Since:
1.5
Author:
Thomas Down, Matthew Pocock, Richard Holland
See Also:
Serialized Form

Nested Class Summary
 
Nested classes/interfaces inherited from interface org.biojavax.bio.db.biosql.BioSQLFeatureFilter
BioSQLFeatureFilter.And, BioSQLFeatureFilter.ByName, BioSQLFeatureFilter.ByNote, BioSQLFeatureFilter.ByNoteTermOnly, BioSQLFeatureFilter.ByRank, BioSQLFeatureFilter.BySequenceName, BioSQLFeatureFilter.BySourceTerm, BioSQLFeatureFilter.BySourceTermName, BioSQLFeatureFilter.ByStrand, BioSQLFeatureFilter.ByTypeTerm, BioSQLFeatureFilter.ByTypeTermName, BioSQLFeatureFilter.ContainedByRichLocation, BioSQLFeatureFilter.HibernateFeatureFilter, BioSQLFeatureFilter.Not, BioSQLFeatureFilter.Or, BioSQLFeatureFilter.OverlapsRichLocation, BioSQLFeatureFilter.Tools
 
Nested classes/interfaces inherited from interface org.biojava.bio.seq.FeatureFilter
FeatureFilter.AnnotationContains, FeatureFilter.ByAncestor, FeatureFilter.ByAnnotation, FeatureFilter.ByAnnotationType, FeatureFilter.ByChild, FeatureFilter.ByClass, FeatureFilter.ByComponentName, FeatureFilter.ByDescendant, FeatureFilter.ByFeature, FeatureFilter.ByPairwiseScore, FeatureFilter.ByParent, FeatureFilter.BySource, FeatureFilter.ByType, FeatureFilter.ContainedByLocation, FeatureFilter.FrameFilter, FeatureFilter.HasAnnotation, FeatureFilter.OnlyChildren, FeatureFilter.OnlyDescendants, FeatureFilter.OverlapsLocation, FeatureFilter.ShadowContainedByLocation, FeatureFilter.ShadowOverlapsLocation, FeatureFilter.StrandFilter
 
Field Summary
 
Fields inherited from interface org.biojavax.bio.db.biosql.BioSQLFeatureFilter
all, none
 
Fields inherited from interface org.biojava.bio.seq.FeatureFilter
leaf, top_level
 
Constructor Summary
protected BioSQLAcceptAllFilter()
           
 
Method Summary
 boolean accept(Feature f)
          This method determines whether a feature is to be accepted.
 Object asCriterion()
          This method returns a Hibernate Criterion object that can be used to query the database.
 Map criterionAliasMap()
          Returns a map of property names (keys) to aliases (values), if the criterion returned by asCriterion() uses aliases at all.
 boolean equals(Object o)
           
 int hashCode()
           
 String toString()
           
 
Methods inherited from class java.lang.Object
clone, finalize, getClass, notify, notifyAll, wait, wait, wait
 

Constructor Detail

BioSQLAcceptAllFilter

protected BioSQLAcceptAllFilter()
Method Detail

asCriterion

public Object asCriterion()
Description copied from interface: BioSQLFeatureFilter
This method returns a Hibernate Criterion object that can be used to query the database.

Specified by:
asCriterion in interface BioSQLFeatureFilter
Returns:
a Hibernate Criterion object representing this filter.

criterionAliasMap

public Map criterionAliasMap()
Description copied from interface: BioSQLFeatureFilter
Returns a map of property names (keys) to aliases (values), if the criterion returned by asCriterion() uses aliases at all. If not, then it must at least return the empty map else you'll get NullPointerExceptions thrown elsewhere.

Specified by:
criterionAliasMap in interface BioSQLFeatureFilter
Returns:
Map a map of property names to aliases used in the criterion.

equals

public boolean equals(Object o)
Overrides:
equals in class Object

accept

public boolean accept(Feature f)
Description copied from interface: FeatureFilter
This method determines whether a feature is to be accepted.

Specified by:
accept in interface FeatureFilter
Parameters:
f - the Feature to evaluate
Returns:
true if this feature is to be selected in, or false if it is to be ignored

hashCode

public int hashCode()
Overrides:
hashCode in class Object

toString

public String toString()
Overrides:
toString in class Object


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